BioSPICE Warehouse - BioCyc Dataset loader version 3.0
Host is 128.18.40.146
Database name is biospice
Data directory is /home/hapuna4/aic/ecocyc/bsubcyc/8.5/data
Organism name is Bacillus subtilis
Source database name is BsubCyc
Source version is 8.5
Loading source database BsubCyc version 8.5

Parsing COMPOUND data from /home/hapuna4/aic/ecocyc/bsubcyc/8.5/data/compounds.dat...
.*** Conversion error on 1.000d-3
Found 590 compounds.  Encountered 1 parse errors

Parsing REACTION data from /home/hapuna4/aic/ecocyc/bsubcyc/8.5/data/reactions.dat...
*** Conversion error on N
Warning: Symbolic or invalid coefficient N for ATP, using 0
*** Conversion error on N
Warning: Symbolic or invalid coefficient N for PPI, using 0
*** Conversion error on N
Warning: Symbolic or invalid coefficient N for PPI, using 0
*** Conversion error on N
Warning: Symbolic or invalid coefficient N for PPI, using 0
.*** Conversion error on N
Warning: Symbolic or invalid coefficient N for NADPH, using 0
*** Conversion error on M
Warning: Symbolic or invalid coefficient M for OXYGEN-MOLECULE, using 0
*** Conversion error on N
Warning: Symbolic or invalid coefficient N for L-CITRULLINE, using 0
Found 776 reactions.  Encountered 7 parse errors

Parsing PROTEIN data from /home/hapuna4/aic/ecocyc/bsubcyc/8.5/data/proteins.dat...
Warning: undefined attribute MOLECULAR-WEIGHT
....Found 4173 proteins.  Encountered 0 parse errors

Parsing PROTEIN SEQUENCE data from /home/hapuna4/aic/ecocyc/bsubcyc/8.5/data/protseq.fasta...
Found 4100 protein sequences.  Encountered 0 parse errors

Parsing GENE data from /home/hapuna4/aic/ecocyc/bsubcyc/8.5/data/genes.dat...
....Found 4221 genes.  Encountered 0 parse errors

Parsing ENZRXN data from /home/hapuna4/aic/ecocyc/bsubcyc/8.5/data/enzrxns.dat...
*** Reaction (null) not found for enzrxn ENZRXN-3926 - ignoring entry 
*** Reaction (null) not found for enzrxn ENZRXN-3925 - ignoring entry 
*** Reaction (null) not found for enzrxn ENZRXN-3924 - ignoring entry 
*** Reaction (null) not found for enzrxn ENZRXN-3923 - ignoring entry 
*** Reaction (null) not found for enzrxn ENZRXN-3921 - ignoring entry 
.Found 720 enzrxns.  Encountered 5 parse errors

Parsing PATHWAY data from /home/hapuna4/aic/ecocyc/bsubcyc/8.5/data/pathways.dat...
Found 117 pathways.  Encountered 0 parse errors
Load is committed, disconnected from database, created dataset 34