Sat Apr  1 15:13:29 PST 2006
Bio-SPICE Warehouse - KEGG Dataset loader version 4.000
Host is 123.45.67.8
Database name is warehouse
Source version is 37.0
Committing after every table load, and every 1000 WIDs
DataSet created, WID is 73
Parsing ORGANISMS data from /biowarehouse/data/kegg/genome...
.syntax error at `
', line 3143.
Unrecognized COMMENT syntax at `
', line 3143.
Found 391 records.  Encountered 2 parse errors
Parsing COMPOUND data from /biowarehouse/data/kegg/ligand/compound...
..............syntax error at `CAS', line 715594.
Found 13754 records.  Encountered 1 parse errors
Parsing ENZYME from /biowarehouse/data/kegg/ligand/enzyme...
syntax error at `ORTHOLOG', line 39.
syntax error at `REFERENCE', line 332.
.................................................................................................syntax error at `=', line 59418.
.....................................................................................................................................................................................................................................................................................................................................................................................Found 4540 entries.  Encountered 3 parse errors
Parsing GENE data from a.aeolicus...
..Parsing GENE data from a.dehalogenans...
....Parsing GENE data from a.fulgidus...
..Parsing GENE data from a.gossypii...
.....Parsing GENE data from a.marginale...
.Parsing GENE data from a.pernix...
..Parsing GENE data from a.phagocytophilum...
..Parsing GENE data from a.thaliana...
.............................Parsing GENE data from a.tumefaciens...
.....Parsing GENE data from a.tumefaciens_c...
.....Parsing GENE data from a.variabilis...
......Parsing GENE data from acinetobacter_adp1...
....Parsing GENE data from anabaena...
......Parsing GENE data from azoarcus_ebn1...
.....Parsing GENE data from b.abortus...
...Parsing GENE data from b.anthracis_a2012...
......Parsing GENE data from b.anthracis_ames0581...
......Parsing GENE data from b.anthracis_sterne...
.....Parsing GENE data from b.aphidicola_bp...
.Parsing GENE data from b.aphidicola_sg...
Parsing GENE data from b.bacteriovorus...
....Parsing GENE data from b.bronchiseptica...
.....Parsing GENE data from b.burgdorferi...
..Parsing GENE data from b.anthracis...
.....Parsing GENE data from b.cereus...
......Parsing GENE data from b.cereus_atcc10987...
......Parsing GENE data from b.cereus_zk...
......Parsing GENE data from b.clausii...
....Parsing GENE data from b.floridanus...
Parsing GENE data from b.fragilis...
.....Parsing GENE data from b.fragilis_nctc9343...
.....Parsing GENE data from b.garinii...
.Parsing GENE data from b.halodurans...
....Parsing GENE data from b.henselae...
.Parsing GENE data from b.japonicum...
.........Parsing GENE data from b.licheniformis...
....Parsing GENE data from b.licheniformis_dsm13...
....Parsing GENE data from b.longum...
..Parsing GENE data from b.mallei...
......Parsing GENE data from b.melitensis...
...Parsing GENE data from b.melitensis_abortus...
...Parsing GENE data from b.parapertussis...
.....Parsing GENE data from b.pennsylvanicus...
Parsing GENE data from b.pertussis...
....Parsing GENE data from b.pseudomallei...
......Parsing GENE data from b.pseudomallei_1710b...
.......Parsing GENE data from b.quintana...
.Parsing GENE data from b.subtilis...
....Parsing GENE data from b.suis...
....Parsing GENE data from b.taurus...
.......................Parsing GENE data from b.thailandensis...
.....Parsing GENE data from b.thetaiotaomicron...
.....Parsing GENE data from b.thuringiensis...
......Parsing GENE data from buchnera...
Parsing GENE data from burkholderia_383...
........Parsing GENE data from c.abortus...
.Parsing GENE data from c.acetobutylicum...
....Parsing GENE data from c.albicans...
......Parsing GENE data from c.burnetii...
...Parsing GENE data from c.caviae...
.Parsing GENE data from c.chlorochromatii...
..Parsing GENE data from c.crescentus...
....Parsing GENE data from c.diphtheriae...
..Parsing GENE data from c.efficiens...
...Parsing GENE data from c.familiaris...
....................Parsing GENE data from c.glutamicum...
...Parsing GENE data from c.glutamicum_b...
...Parsing GENE data from c.elegans...
..syntax error at `AL008585.2', line 126029.
.syntax error at `11777159),complement(Z93398.1', line 136757.
.....syntax error at `Z35662.1', line 403835.
..............syntax error at `11497916),complement(11497650..11497717),complement(Z93779.1', line 1051330.
.syntax error at `14771479),complement(14770994..14771328),complement(Z93339.1', line 1080841.
.Parsing GENE data from c.hominis...
...Parsing GENE data from c.hydrogenoformans...
...Parsing GENE data from c.jeikeium...
..Parsing GENE data from c.jejuni...
..Parsing GENE data from c.jejuni_rm1221...
..Parsing GENE data from c.merolae...
.....Parsing GENE data from c.muridarum...
.Parsing GENE data from c.neoformans...
.......Parsing GENE data from c.parvum...
...Parsing GENE data from c.perfringens...
...Parsing GENE data from c.pneumoniae...
.Parsing GENE data from c.pneumoniae_ar39...
.Parsing GENE data from c.pneumoniae_j138...
.Parsing GENE data from c.pneumoniae_tw183...
.Parsing GENE data from c.psychrerythraea...
.....Parsing GENE data from c.tepidum...
...Parsing GENE data from c.tetani...
..Parsing GENE data from c.trachomatis...
.Parsing GENE data from c.trachomatis_a...
.Parsing GENE data from c.violaceum...
.....Parsing GENE data from cyanobacteria_cya...
...Parsing GENE data from cyanobacteria_cyb...
...Parsing GENE data from d.aromatica...
....Parsing GENE data from d.desulfuricans...
....Parsing GENE data from d.discoideum...
.............Parsing GENE data from d.ethenogenes...
..Parsing GENE data from d.melanogaster...
.................Parsing GENE data from d.psychrophila...
...Parsing GENE data from d.radiodurans...
...Parsing GENE data from d.rerio...
.......Parsing GENE data from d.vulgaris...
....Parsing GENE data from dehalococcoides_cbdb1...
.Parsing GENE data from e.canis...
.Parsing GENE data from e.carotovora...
.....Parsing GENE data from e.chaffeensis...
.Parsing GENE data from e.coli...
.....Parsing GENE data from e.coli_cft073...
.....Parsing GENE data from e.coli_j...
.....Parsing GENE data from e.coli_o157...
.....Parsing GENE data from e.coli_o157j...
......Parsing GENE data from e.cuniculi...
..Parsing GENE data from e.faecalis...
...Parsing GENE data from e.histolytica...
..........Parsing GENE data from e.litoralis...
...Parsing GENE data from e.ruminantium...
.Parsing GENE data from e.ruminantium_gardel...
.Parsing GENE data from e.ruminantium_welgevonden...
.Parsing GENE data from f.nucleatum...
..Parsing GENE data from f.tularensis...
..Parsing GENE data from frankia_cci3...
.....Parsing GENE data from g.gallus...
..................Parsing GENE data from g.kaustophilus...
....Parsing GENE data from g.metallireducens...
...Parsing GENE data from g.oxydans...
...Parsing GENE data from g.sulfurreducens...
...Parsing GENE data from g.violaceus...
.....Parsing GENE data from h.chejuensis...
.......Parsing GENE data from h.ducreyi...
..Parsing GENE data from h.hepaticus...
..Parsing GENE data from h.influenzae...
.Parsing GENE data from h.influenzae_nt...
..Parsing GENE data from h.marismortui...
.....Parsing GENE data from h.pylori...
.Parsing GENE data from h.pylori_j99...
..Parsing GENE data from h.sapiens...
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syntax error at `|', line 6010.
syntax error at `-', line 6218.
syntax error at `.', line 7276.
syntax error at `|', line 7345.
syntax error at `.', line 7613.
syntax error at `|', line 9425.
syntax error at `and', line 13278.
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syntax error at `|', line 13482.
syntax error at `|', line 15129.
syntax error at `|', line 15907.
syntax error at `|', line 18297.
syntax error at `|', line 18352.
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syntax error at `or', line 19134.
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syntax error at `|', line 25151.
syntax error at `.', line 25705.
syntax error at `.', line 34941.
syntax error at `|', line 39164.
syntax error at `|', line 48804.
.syntax error at `|', line 49462.
syntax error at `|', line 50638.
syntax error at `|', line 56001.
syntax error at `.', line 56320.
syntax error at `|', line 56464.
syntax error at `.', line 59028.
syntax error at `|', line 59478.
syntax error at `|', line 59510.
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syntax error at `|', line 59579.
syntax error at `|', line 61056.
syntax error at `.', line 63694.
syntax error at `|', line 70190.
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syntax error at `|', line 76188.
syntax error at `|', line 76575.
syntax error at `.', line 78924.
syntax error at `|', line 86449.
syntax error at `|', line 87378.
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syntax error at `|', line 88128.
syntax error at `|', line 102069.
syntax error at `.', line 102636.
syntax error at `|', line 102949.
syntax error at `|', line 103001.
syntax error at `|', line 104354.
syntax error at `|', line 106911.
.syntax error at `|', line 110260.
syntax error at `|', line 111669.
syntax error at `|', line 112406.
syntax error at `.', line 114740.
syntax error at `|', line 118231.
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syntax error at `|', line 126006.
syntax error at `.', line 126398.
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syntax error at `.', line 137251.
syntax error at `or', line 137392.
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syntax error at `|', line 158706.
.syntax error at `.', line 167280.
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syntax error at `;', line 170052.
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syntax error at `.', line 173167.
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syntax error at `|', line 217999.
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syntax error at `.', line 226014.
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syntax error at `|', line 278742.
syntax error at `.', line 280027.
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syntax error at `|', line 287353.
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syntax error at `.', line 295123.
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syntax error at `|', line 305468.
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syntax error at `|', line 317902.
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.syntax error at `;', line 358520.
syntax error at `|', line 379027.
.syntax error at `|', line 433573.
syntax error at `|', line 437002.
syntax error at `|', line 444011.
syntax error at `.', line 453543.
.syntax error at `|', line 534153.
syntax error at `|', line 534206.
.syntax error at `|', line 541780.
syntax error at `;', line 550956.
syntax error at `|', line 556507.
syntax error at `.', line 560621.
syntax error at `|', line 566225.
.syntax error at `;', line 630684.
.syntax error at `|', line 685474.
.syntax error at `;', line 709124.
.syntax error at `;', line 754532.
syntax error at `|', line 797796.
.syntax error at `|', line 809163.
.syntax error at `|', line 875911.
syntax error at `|', line 896414.
.syntax error at `|', line 925331.
syntax error at `|', line 926214.
.syntax error at `;', line 946758.
syntax error at `|', line 951023.
syntax error at `|', line 958826.
syntax error at `|', line 969400.
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.syntax error at `;', line 993940.
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...Parsing GENE data from halobacterium...
...Parsing GENE data from i.loihiensis...
..Parsing GENE data from jannaschia_ccs1...
.....Parsing GENE data from l.acidophilus...
..Parsing GENE data from l.innocua...
...Parsing GENE data from l.interrogans...
....Parsing GENE data from l.interrogans_copenhageni...
....Parsing GENE data from l.johnsonii...
..Parsing GENE data from l.lactis...
...Parsing GENE data from l.major...
.........Parsing GENE data from l.monocytogenes...
...Parsing GENE data from l.monocytogenes_f2365...
...Parsing GENE data from l.plantarum...
...Parsing GENE data from l.pneumophila...
...Parsing GENE data from l.pneumophila_lens...
...Parsing GENE data from l.pneumophila_paris...
...Parsing GENE data from l.sakei...
..Parsing GENE data from l.xyli...
..Parsing GENE data from m.acetivorans...
.....Parsing GENE data from m.avium_paratuberculosis...
.....Parsing GENE data from m.barkeri...
...Parsing GENE data from m.bovis...
....Parsing GENE data from m.capricolum...
.Parsing GENE data from m.capsulatus...
...Parsing GENE data from m.florum...
.Parsing GENE data from m.gallisepticum...
.Parsing GENE data from m.genitalium...
Parsing GENE data from m.hungatei...
....Parsing GENE data from m.hyopneumoniae...
Parsing GENE data from m.hyopneumoniae_7448...
.Parsing GENE data from m.hyopneumoniae_j...
.Parsing GENE data from m.jannaschii...
..Parsing GENE data from m.kandleri...
.Parsing GENE data from m.leprae...
...Parsing GENE data from m.loti...
.......Parsing GENE data from m.magneticum...
.....Parsing GENE data from m.maripaludis...
..Parsing GENE data from m.mazei...
...Parsing GENE data from m.mobile...
.Parsing GENE data from m.musculus...
.......................Parsing GENE data from m.mycoides...
.Parsing GENE data from m.penetrans...
..Parsing GENE data from m.pneumoniae...
Parsing GENE data from m.pulmonis...
.Parsing GENE data from m.stadtmanae...
..Parsing GENE data from m.succiniciproducens...
..Parsing GENE data from m.synoviae...
.Parsing GENE data from m.thermoacetica...
..Parsing GENE data from m.thermoautotrophicum...
..Parsing GENE data from m.tuberculosis...
....Parsing GENE data from m.tuberculosis_cdc1551...
.....Parsing GENE data from n.aromaticivorans...
...Parsing GENE data from n.equitans...
.Parsing GENE data from n.europaea...
..Parsing GENE data from n.farcinica...
......Parsing GENE data from n.gonorrhoeae...
..Parsing GENE data from n.meningitidis...
...Parsing GENE data from n.meningitidis_a...
..Parsing GENE data from n.multiformis...
...Parsing GENE data from n.oceani...
...Parsing GENE data from n.pharaonis...
...Parsing GENE data from n.sennetsu...
.Parsing GENE data from n.winogradskyi...
...Parsing GENE data from o.iheyensis...
....Parsing GENE data from o.sativa...
......Parsing GENE data from p.abyssi...
..Parsing GENE data from p.acnes...
...Parsing GENE data from p.aerophilum...
..Parsing GENE data from p.aeruginosa...
......Parsing GENE data from p.arcticum...
..Parsing GENE data from p.carbinolicus...
...Parsing GENE data from p.falciparum...
......Parsing GENE data from p.fluorescens...
......Parsing GENE data from p.fluorescens_pfo1...
......Parsing GENE data from p.furiosus...
..Parsing GENE data from p.gingivalis...
..Parsing GENE data from p.haloplanktis...
....Parsing GENE data from p.horikoshii...
..Parsing GENE data from p.luminescens...
.....Parsing GENE data from p.luteolum...
..Parsing GENE data from p.marinus...
..Parsing GENE data from p.marinus_med4...
.Parsing GENE data from p.marinus_mit9312...
..Parsing GENE data from p.marinus_mit9313...
...Parsing GENE data from p.marinus_natl2a...
..Parsing GENE data from p.multocida...
..Parsing GENE data from p.profundum...
.....Parsing GENE data from p.putida...
......Parsing GENE data from p.syringae...
......Parsing GENE data from p.syringae_b728a...
.....Parsing GENE data from p.syringae_phaseolicola...
.....Parsing GENE data from p.torridus...
..Parsing GENE data from p.troglodytes...
......................Parsing GENE data from p.ubique...
.Parsing GENE data from parachlamydia_uwe25...
..Parsing GENE data from phytoplasma_aywb...
.Parsing GENE data from phytoplasma_oy...
.Parsing GENE data from r.baltica...
.......Parsing GENE data from r.conorii...
..Parsing GENE data from r.etli...
.....Parsing GENE data from r.eutropha...
.......Parsing GENE data from r.felis...
..Parsing GENE data from r.norvegicus...
.syntax error at `-', line 102186.
......................Parsing GENE data from r.palustris...
.....Parsing GENE data from r.palustris_haa2...
....Parsing GENE data from r.prowazekii...
.Parsing GENE data from r.rubrum...
....Parsing GENE data from r.solanacearum...
.....Parsing GENE data from r.sphaeroides...
.....Parsing GENE data from r.typhi...
.Parsing GENE data from s.acidocaldarius...
..Parsing GENE data from s.agalactiae...
..Parsing GENE data from s.agalactiae_a909...
..Parsing GENE data from s.agalactiae_nem316...
...Parsing GENE data from s.aureus_col...
..Parsing GENE data from s.aureus_mrsa252...
...Parsing GENE data from s.aureus_mssa476...
...Parsing GENE data from s.aureus_mw2...
...Parsing GENE data from s.aureus_mu50...
..Parsing GENE data from s.aureus_n315...
...Parsing GENE data from s.aureus_nctc8325...
...Parsing GENE data from s.aureus_rf122...
...Parsing GENE data from s.aureus_usa300...
..Parsing GENE data from s.avermitilis...
........Parsing GENE data from s.cerevisiae...
......Parsing GENE data from s.coelicolor...
.........Parsing GENE data from s.dysenteriae...
.....Parsing GENE data from s.enterica_choleraesuis...
.....Parsing GENE data from s.enterica_paratyphi...
....Parsing GENE data from s.boydii...
.....Parsing GENE data from s.epidermidis...
..Parsing GENE data from s.epidermidis_rp62a...
...Parsing GENE data from s.flexneri...
.....Parsing GENE data from s.flexneri_2457t...
....Parsing GENE data from s.glossinidius...
...Parsing GENE data from s.haemolyticus...
...Parsing GENE data from s.meliloti...
......Parsing GENE data from s.mutans...
..Parsing GENE data from s.oneidensis...
.....Parsing GENE data from s.pneumoniae...
..Parsing GENE data from s.pneumoniae_r6...
..Parsing GENE data from s.pombe...
.....Parsing GENE data from s.pomeroyi...
.....Parsing GENE data from s.pyogenes...
.Parsing GENE data from s.pyogenes_m18...
..Parsing GENE data from s.pyogenes_m3...
..Parsing GENE data from s.pyogenes_mgas10394...
..Parsing GENE data from s.pyogenes_mgas5005...
..Parsing GENE data from s.pyogenes_mgas6180...
..Parsing GENE data from s.pyogenes_ssi1...
..Parsing GENE data from s.ruber...
...Parsing GENE data from s.saprophyticus...
...Parsing GENE data from s.scrofa...
.Parsing GENE data from s.solfataricus...
...Parsing GENE data from s.sonnei...
....Parsing GENE data from s.thermophilum...
....Parsing GENE data from s.thermophilus_cnrz...
..Parsing GENE data from s.thermophilus_lmg...
..Parsing GENE data from s.tokodaii...
...Parsing GENE data from s.typhi_ty2...
....Parsing GENE data from s.typhimurium...
.....Parsing GENE data from synechococcus_cc9605...
...Parsing GENE data from synechococcus_cc9902...
..Parsing GENE data from synechococcus_pcc6301...
...Parsing GENE data from synechococcus_pcc7942...
...Parsing GENE data from synechococcus_wh8102...
..Parsing GENE data from synechocystis...
...Parsing GENE data from t.acidophilum...
..Parsing GENE data from t.annulata...
....Parsing GENE data from t.brucei...
.........Parsing GENE data from t.crunogena...
..Parsing GENE data from s.typhi...
.....Parsing GENE data from t.cruzi...
....................Parsing GENE data from t.denitrificans...
...Parsing GENE data from t.denitrificans_atcc33889...
..Parsing GENE data from t.denticola...
...Parsing GENE data from t.elongatus...
..Parsing GENE data from t.fusca...
...Parsing GENE data from t.kodakaraensis...
...Parsing GENE data from t.maritima...
..Parsing GENE data from t.pallidum...
.Parsing GENE data from t.parva...
....Parsing GENE data from t.tengcongensis...
..Parsing GENE data from t.thermophilus...
...Parsing GENE data from t.thermophilus_hb8...
..Parsing GENE data from t.volcanium...
..Parsing GENE data from t.whipplei...
Parsing GENE data from t.whipplei_s...
.Parsing GENE data from u.urealyticum...
.Parsing GENE data from v.cholerae...
....Parsing GENE data from v.fischeri...
....Parsing GENE data from v.parahaemolyticus...
.....Parsing GENE data from v.vulnificus...
....Parsing GENE data from v.vulnificus_yj016...
......Parsing GENE data from w.brevipalpis...
Parsing GENE data from w.succinogenes...
..Parsing GENE data from wolbachia_bma...
.Parsing GENE data from wolbachia_mel...
..Parsing GENE data from x.axonopodis...
....Parsing GENE data from x.campestris...
....Parsing GENE data from x.campestris_b...
.....Parsing GENE data from x.campestris_vesicatoria...
.....Parsing GENE data from x.fastidiosa...
...Parsing GENE data from x.fastidiosa_t...
..Parsing GENE data from x.laevis...
.......Parsing GENE data from x.oryzae...
.....Parsing GENE data from x.tropicalis...
....Parsing GENE data from y.pestis...
....Parsing GENE data from y.pestis_kim...
.....Parsing GENE data from y.pestis_mediaevails...
....Parsing GENE data from y.pseudotuberculosis...
....Parsing GENE data from z.mobilis...
..Total of 1334288 gene entries.  Encountered 164 parse errors
Load is committed, disconnected from database, DataSet.WID is 73
Sun Apr  2 05:00:20 PDT 2006